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#pathogen

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DoomsdaysCW<p>Beach day? NOT! Eeeeewwww!</p><p><a href="https://kolektiva.social/tags/Pathogen" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Pathogen</span></a> risk found at 78% of <a href="https://kolektiva.social/tags/Maine" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Maine</span></a> coastal <a href="https://kolektiva.social/tags/beaches" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>beaches</span></a> tested in 2024, report finds</p><p>July 8, 2025</p><p>"The report noted Maine beaches with persistent pollution problems last year included <a href="https://kolektiva.social/tags/GoodiesBeach" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>GoodiesBeach</span></a> in <a href="https://kolektiva.social/tags/RockportME" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>RockportME</span></a>, <a href="https://kolektiva.social/tags/GoochsBeach" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>GoochsBeach</span></a> in <a href="https://kolektiva.social/tags/KennebunkME" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>KennebunkME</span></a>, <a href="https://kolektiva.social/tags/CapeNeddick" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>CapeNeddick</span></a> Beach, <a href="https://kolektiva.social/tags/LaiteBeach" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>LaiteBeach</span></a> in <a href="https://kolektiva.social/tags/CamdenME" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>CamdenME</span></a>, Little Beach in <a href="https://kolektiva.social/tags/OgunquitME" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>OgunquitME</span></a>, <a href="https://kolektiva.social/tags/FerryBeach" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>FerryBeach</span></a> in <a href="https://kolektiva.social/tags/ScarboroughME" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>ScarboroughME</span></a>, <a href="https://kolektiva.social/tags/WillardBeach" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>WillardBeach</span></a> in <a href="https://kolektiva.social/tags/SouthPortlandME" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>SouthPortlandME</span></a>, <a href="https://kolektiva.social/tags/MothersBeach" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>MothersBeach</span></a> in Kennebunk, and <a href="https://kolektiva.social/tags/GooseRocksBeach" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>GooseRocksBeach</span></a> in <a href="https://kolektiva.social/tags/KennebunkportME" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>KennebunkportME</span></a> ."</p><p>Source:<br><a href="https://www.msn.com/en-us/health/other/pathogen-risk-found-at-78-of-maine-coastal-beaches-tested-in-2024-report-finds/ar-AA1Icy9m?ocid=winp2fptaskbar&amp;cvid=d56d1d887b4b43bb9d10ee87215742d4&amp;ei=8" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://www.</span><span class="ellipsis">msn.com/en-us/health/other/pat</span><span class="invisible">hogen-risk-found-at-78-of-maine-coastal-beaches-tested-in-2024-report-finds/ar-AA1Icy9m?ocid=winp2fptaskbar&amp;cvid=d56d1d887b4b43bb9d10ee87215742d4&amp;ei=8</span></a></p><p><a href="https://kolektiva.social/tags/WaterIsLife" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>WaterIsLife</span></a> <a href="https://kolektiva.social/tags/MaineBeaches" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>MaineBeaches</span></a> <a href="https://kolektiva.social/tags/SewagePollution" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>SewagePollution</span></a> <a href="https://kolektiva.social/tags/OceansAreLife" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>OceansAreLife</span></a></p>
Science Updates<p>How One Gene Helped Plague Persistently Cause Pandemics</p><p>Bubonic plague has caused the deadliest pandemic in history. The bacterium that causes bubonic plague, known as Yersinia pestis can cause severe illness and death. Now reporting in Science, researchers have shown how one gene in the Yersinia pestis genome has enabled its survival over hundreds of years, with tweaks to virulence and deadliness.</p><p><a href="https://mastodon.social/tags/plague" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>plague</span></a> <a href="https://mastodon.social/tags/genetics" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>genetics</span></a> <a href="https://mastodon.social/tags/science" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>science</span></a> <a href="https://mastodon.social/tags/research" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>research</span></a> <a href="https://mastodon.social/tags/biology" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>biology</span></a> <a href="https://mastodon.social/tags/pathogen" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>pathogen</span></a> </p><p><a href="https://www.labroots.com/trending/genetics-and-genomics/29133/gene-helped-plague-persistently-cause-pandemics" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://www.</span><span class="ellipsis">labroots.com/trending/genetics</span><span class="invisible">-and-genomics/29133/gene-helped-plague-persistently-cause-pandemics</span></a></p>
Europe Says<p><a href="https://www.europesays.com/1943530/" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://www.</span><span class="">europesays.com/1943530/</span><span class="invisible"></span></a> Report shows alarming measles resurgence in Europe and US <a href="https://pubeurope.com/tags/Antibodies" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Antibodies</span></a> <a href="https://pubeurope.com/tags/autism" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>autism</span></a> <a href="https://pubeurope.com/tags/blindness" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>blindness</span></a> <a href="https://pubeurope.com/tags/brain" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>brain</span></a> <a href="https://pubeurope.com/tags/children" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>children</span></a> <a href="https://pubeurope.com/tags/deafness" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>deafness</span></a> <a href="https://pubeurope.com/tags/disability" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>disability</span></a> <a href="https://pubeurope.com/tags/europe" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>europe</span></a> <a href="https://pubeurope.com/tags/healthcare" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>healthcare</span></a> <a href="https://pubeurope.com/tags/hospital" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>hospital</span></a> <a href="https://pubeurope.com/tags/hygiene" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>hygiene</span></a> <a href="https://pubeurope.com/tags/ImmuneSystem" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>ImmuneSystem</span></a> <a href="https://pubeurope.com/tags/InfectiousDiseases" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>InfectiousDiseases</span></a> <a href="https://pubeurope.com/tags/Measles" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Measles</span></a> <a href="https://pubeurope.com/tags/medicine" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>medicine</span></a> <a href="https://pubeurope.com/tags/Meningitis" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Meningitis</span></a> <a href="https://pubeurope.com/tags/MMR" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>MMR</span></a> <a href="https://pubeurope.com/tags/Mumps" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Mumps</span></a> <a href="https://pubeurope.com/tags/pathogen" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>pathogen</span></a> <a href="https://pubeurope.com/tags/Pneumonia" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Pneumonia</span></a> <a href="https://pubeurope.com/tags/polio" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>polio</span></a> <a href="https://pubeurope.com/tags/PublicHealth" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>PublicHealth</span></a> <a href="https://pubeurope.com/tags/research" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>research</span></a> <a href="https://pubeurope.com/tags/Respiratory" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Respiratory</span></a> <a href="https://pubeurope.com/tags/Rubella" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Rubella</span></a> <a href="https://pubeurope.com/tags/Vaccine" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Vaccine</span></a> <a href="https://pubeurope.com/tags/virus" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>virus</span></a></p>
nf-core<p>Pipeline release! nf-core/taxprofiler v1.2.3 - v1.2.3 - Bouncy Basenji Patch!</p><p>Please see the changelog: <a href="https://github.com/nf-core/taxprofiler/releases/tag/1.2.3" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">github.com/nf-core/taxprofiler</span><span class="invisible">/releases/tag/1.2.3</span></a></p><p><a href="https://mstdn.science/tags/classification" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>classification</span></a> <a href="https://mstdn.science/tags/illumina" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>illumina</span></a> <a href="https://mstdn.science/tags/longreads" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>longreads</span></a> <a href="https://mstdn.science/tags/metagenomics" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>metagenomics</span></a> <a href="https://mstdn.science/tags/microbiome" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>microbiome</span></a> <a href="https://mstdn.science/tags/nanopore" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>nanopore</span></a> <a href="https://mstdn.science/tags/pathogen" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>pathogen</span></a> <a href="https://mstdn.science/tags/profiling" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>profiling</span></a> <a href="https://mstdn.science/tags/shotgun" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>shotgun</span></a> <a href="https://mstdn.science/tags/taxonomicclassification" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>taxonomicclassification</span></a> <a href="https://mstdn.science/tags/taxonomicprofiling" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>taxonomicprofiling</span></a> <a href="https://mstdn.science/tags/nfcore" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>nfcore</span></a> <a href="https://mstdn.science/tags/openscience" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>openscience</span></a> <a href="https://mstdn.science/tags/nextflow" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>nextflow</span></a> <a href="https://mstdn.science/tags/bioinformatics" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>bioinformatics</span></a></p>
Mx Verda<p>X is terrible, but after the Meta news on explicitly allowing transphobia / transmisia, overall it's just been a tough week. <br>Idk what I have but my asthma attack started last week. Elevated neutrophils indicate bacterial infection, my GP said? So either it was "probably viral" like the OoH 111 GP said and became bacterial as well, or I was unlucky that it was bacterial to begin with. </p><p>I've been on Prednisolone, a corticosteroid since the 9th; then last night I started Doxycyline, an antibiotic, and Montelukast. <br>Montelukast is a leukotriene receptor antagonist, so it blocks leukotrienes, my patient pamphlet says. </p><p>Got a chest X ray out of it, at least. (Had back pain behind my ex-gallbladder since its removal anyway.) <br>Let this be a lesson not to lessen your mask discipline or stubbornness when other people peer pressure you to take risks with your health. <br>This is my first asthma exacerbation in a decade and I do not want to continue experiencing this. I do not recommend it. The people telling me I was 'paranoid', 'over-thinking it', 'worried about nothing' and more do NOT have to feel what I am feeling. </p><p>Teenage boys in public who choose to whine at me and intentionally coughing towards me (what?!!?) is super aggressive, creepy, entitled, and harmful to everyone witnessing that. Still, my upper and mid back has not stopped aching. I don't get fevers and I don't have a cough. Only you know your body. </p><p>Some people choose to care about harm reduction; others don't. Do right by yourself and do your sustainable best by others. I believe in you! </p><p><a href="https://www.youtube.com/watch?v=My_wEXmNgtA" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://www.</span><span class="ellipsis">youtube.com/watch?v=My_wEXmNgt</span><span class="invisible">A</span></a> </p><p><a href="https://lgbtqia.space/tags/sick" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>sick</span></a> <a href="https://lgbtqia.space/tags/illness" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>illness</span></a> <a href="https://lgbtqia.space/tags/RespiratoryIllness" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>RespiratoryIllness</span></a> <a href="https://lgbtqia.space/tags/PostViralIllness" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>PostViralIllness</span></a> <a href="https://lgbtqia.space/tags/ChronicIllnessMemes" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>ChronicIllnessMemes</span></a> <a href="https://lgbtqia.space/tags/virus" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>virus</span></a> <a href="https://lgbtqia.space/tags/bacteria" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>bacteria</span></a> <a href="https://lgbtqia.space/tags/viral" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>viral</span></a> <a href="https://lgbtqia.space/tags/sickness" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>sickness</span></a> <a href="https://lgbtqia.space/tags/infection" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>infection</span></a> <a href="https://lgbtqia.space/tags/InfectionPrevention" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>InfectionPrevention</span></a> <a href="https://lgbtqia.space/tags/pathogen" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>pathogen</span></a> <a href="https://lgbtqia.space/tags/pathogensAirborneTransmission" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>pathogensAirborneTransmission</span></a> <a href="https://lgbtqia.space/tags/infectious" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>infectious</span></a> <a href="https://lgbtqia.space/tags/disease" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>disease</span></a> <a href="https://lgbtqia.space/tags/diseases" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>diseases</span></a> <a href="https://lgbtqia.space/tags/AsthmaAttacked" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>AsthmaAttacked</span></a> <a href="https://lgbtqia.space/tags/AsthmaExacerbation" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>AsthmaExacerbation</span></a> <a href="https://lgbtqia.space/tags/breathe" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>breathe</span></a> <a href="https://lgbtqia.space/tags/breath" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>breath</span></a></p>
Jonathan<p>A quick thread about what viruses have been found to be transmitting in the air, from A SINGLE ARTiCLE FROM 2013</p><p>I originally posted this on Twitter April 28, 2021 and had been posting for a year by then.</p><p>The article:</p><p>La Rosa et al. 2013. Viral infections acquired Indoors through airborne, droplet or contact transmission. <a href="https://pubmed.ncbi.nlm.nih.gov/23771256/" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">pubmed.ncbi.nlm.nih.gov/237712</span><span class="invisible">56/</span></a></p><p><a href="https://mastodon.social/tags/COVIDisAirborne" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>COVIDisAirborne</span></a> <br><a href="https://mastodon.social/tags/pathogen" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>pathogen</span></a> <a href="https://mastodon.social/tags/IPAC" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>IPAC</span></a> <a href="https://mastodon.social/tags/HowToGetItAllWrongAndNotLoseYourJob" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>HowToGetItAllWrongAndNotLoseYourJob</span></a></p>
Tommi Mäklin<p>Hi! I recently migrated to fosstodon.org so reposting my <a href="https://fosstodon.org/tags/introduction" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>introduction</span></a> </p><p>I'm a researcher working on statistical modelling and developing <a href="https://fosstodon.org/tags/bioinformatics" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>bioinformatics</span></a> software for analysing <a href="https://fosstodon.org/tags/metagenomics" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>metagenomics</span></a> and <a href="https://fosstodon.org/tags/pathogen" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>pathogen</span></a> <a href="https://fosstodon.org/tags/genomics" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>genomics</span></a> data. I also like tinkering with data compression and writing wrapper libraries for that.</p><p>Outside of that I do some amateurish <a href="https://fosstodon.org/tags/photography" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>photography</span></a> and trade unionist / left wing politics stuff but typically post about these elsewhere.</p>
Lars Barquist<p>I guess I should do an <a href="https://mstdn.science/tags/introduction" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>introduction</span></a> -- I'm a computational biologist working at the intersection of bacterial <a href="https://mstdn.science/tags/PathogenGenomics" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>PathogenGenomics</span></a> and <a href="https://mstdn.science/tags/FunctionalGenomics" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>FunctionalGenomics</span></a>, mostly on sequencing-based technologies, and run a research group at the Helmholtz Institute for RNA-based Infection Research in Würzburg. </p><p>We dabble in <a href="https://mstdn.science/tags/MachineLearning" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>MachineLearning</span></a>, <a href="https://mstdn.science/tags/BayesianStatistics" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>BayesianStatistics</span></a>, and <a href="https://mstdn.science/tags/DataVisualization" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>DataVisualization</span></a>, figuring out ways to apply these techniques to investigate <a href="https://mstdn.science/tags/Pathogen" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Pathogen</span></a> <a href="https://mstdn.science/tags/GeneRegulation" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>GeneRegulation</span></a> and <a href="https://mstdn.science/tags/Evolution" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Evolution</span></a>.</p>
Pedro Vale<p><a href="https://ecoevo.social/tags/introduction" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>introduction</span></a> </p><p>Hi! I'm a lecturer in <a href="https://ecoevo.social/tags/Evolutionary" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Evolutionary</span></a> <a href="https://ecoevo.social/tags/Ecology" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Ecology</span></a> at the University of <a href="https://ecoevo.social/tags/Edinburgh" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Edinburgh</span></a>, Scotland. My research uses the fruit fly <a href="https://ecoevo.social/tags/Drosophila" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Drosophila</span></a> as an established model of <a href="https://ecoevo.social/tags/infection" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>infection</span></a>, <a href="https://ecoevo.social/tags/immunity" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>immunity</span></a>, and <a href="https://ecoevo.social/tags/behaviour" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>behaviour</span></a> to investigate the causes of individual <a href="https://ecoevo.social/tags/variation" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>variation</span></a> in <a href="https://ecoevo.social/tags/immune" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>immune</span></a> responses, <a href="https://ecoevo.social/tags/physiological" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>physiological</span></a> traits and <a href="https://ecoevo.social/tags/social" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>social</span></a> behaviours, and the consequences of this variation for <a href="https://ecoevo.social/tags/pathogen" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>pathogen</span></a> <a href="https://ecoevo.social/tags/transmission" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>transmission</span></a> and <a href="https://ecoevo.social/tags/evolution" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>evolution</span></a>.</p>
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