"Scalable image-based visualization and alignment of spatial transcriptomics datasets", by Preibisch et al. 2025 @preibischs
https://www.sciencedirect.com/science/article/pii/S2405471225000973
#transcriptomics #BioimageInformatics
https://www.europesays.com/1964604/ SAMBAI Selects Akoya’s PhenoCycler-Fusion Spatial Proteomics Technology for Large-Scale Cancer Study #AkoyaBiosciences #america #cancer #cancers #News #Phenocycleru00aeFusionSystem #Proteomics #science #SpatialGenomics #technology #topics #Transcriptomics #TranslationalMedicine #UnitedStates #UnitedStatesOfAmerica #US #USA
Pipeline release! nf-core/molkart v1.1.0 - 1.1.0 - Resolution Road!
Please see the changelog: https://github.com/nf-core/molkart/releases/tag/1.1.0
I am very happy to announce that our work on hemichordate gene expression and chromatin accessibility dynamics is now published on Nature Ecology and Evolution! https://www.nature.com/articles/s41559-024-02562-x
Very happy that our review paper "A primer on #correlation-based #dimension #reduction methods for #multi-omics analysis" is out. Thanks to the reviewers & journal too for their help.
https://royalsocietypublishing.org/doi/10.1098/rsif.2023.0344
#genomics #omics #systems #data #model #modelling #biology #transcriptomics
Dear All,
The Workshop on Genomics, and the Workshop on Phylogenomics are now open for applications for 2024!
Workshop on Genomics - 7th - 20th January 2024 - https://evomics.org/2024-workshop-on-genomics/
Workshop on Phylogenomics - 21st - 2nd February 2024 - https://evomics.org/2024-workshop-on-phylogenomics-cesky-krumlov/
There is also some limited Equal Opportunities funding available.
#bioinformatics #genomics #phylogenomics
#transcriptomics #evomics24 #evomics2024
Hey there!
I'm a French researcher in developmental biology, focusing on mammalian sex determination and gonadal development at the genetic level. I have a PhD in bioinformatics but I do wet and dry lab.
I am a free (as in freedom) and open source software advocate, formerly actively involved in FOSS groups.
I love dataviz, photography, classic rock music, and playing video games.
I moved from another Mastodon instance.
#introductions #stem #DevBio #genetics #genomics #transcriptomics #SexDet
I forgot to do this, so here it is:
Hello #mastodon! I'm Luca, a #PhD student in #complexsystems at the University of Turin (#unito).
I mainly work in #genomics and #transcriptomics. My project involves the study of the #cancer #transportome, and its role in the overall #cellbiology.
I code in #python and #R, but i'm trying to (slowly) learn about #rustlang. I use #archlinux, btw.
I also play a ton of #boardgames and #videogames. I love #mechanicalkeyboard (s) and own a #corne myself.
Let’s do a proper #introduction. I am biologist, with MSc in #biotechnology and in #bioinformatics. I did my PhD in #anatomy and #transcriptomics of wound-healing and resprouting in the Canary Island pine. My current project focus on #genomics, #epigenomics and association studies in Picea abies, and I also collaborate in the transcriptomic response in Dutch elm disease (#DED) and Ash dieback (#ADB).
I enjoy travelling, films, and listening/playing music.
#TheWire is the best series ever.
I guess it might be time for an #introduction on this site.
I am a research analyst in academic #bioinformatics. I'm interested in new computational #metabolomics methods, #transcriptomics, data integration, etc.
I know just enough #statistics to be useful / dangerous, depending on your POV.
I use #rstats heavily (in a lab that mostly uses #python), and believe in the value of graphing your data, as well as making work reproducible and as open as possible.
